PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_03951
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 263aa    MW: 29044.4 Da    PI: 8.2697
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_03951genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH438.3e-1487131554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 h e+Er+RR+++N+ f +Lr l+P+       K++Ka+ L  A+eYI +L
  PEQU_03951  87 HVEAERQRREKLNQLFYRLRALVPNV-----SKMDKASLLSDAIEYITEL 131
                 899**********************6.....5***************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.60982131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.28E-1985152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.2E-1987153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-1187131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.89E-1387135No hitNo description
SMARTSM003533.1E-1588137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MACIPVAGGV LELGSTNEVF ENLETISRVR DSFGFHIAIS NPQFYTEDPI SCGVSTSILK  60
AGGSENSDRP RKRCRKTVKG PEVPLDHVEA ERQRREKLNQ LFYRLRALVP NVSKMDKASL  120
LSDAIEYITE LRKKIGSLES CNESLRSQVD ALKSNADRVR RGFCGTEEKL EGVEMEVKVI  180
EMEAMIRVQS KRKGYPPARF MAALDAVGLE LLYGSLSVVK DLMVQQVTVR MADCSSQEKL  240
CKEIFARLGG DAAAAAAPAN TRI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009413229.11e-57PREDICTED: transcription factor MYC2-like
SwissprotQ336P59e-55MYC2_ORYSJ; Transcription factor MYC2
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44523157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17880.12e-52bHLH family protein